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A new method for mining information of gut microbiome with probabilistic topic models

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Bibliographic Details
Main Authors: Xin, Xiong, Minrui, Li, Yuyan, Ren
Format: Book
Language:English
Published: Springer 2023
Subjects:
probabilistic topic models
Online Access:https://link.springer.com/article/10.1007/s11042-022-13916-7
https://dlib.phenikaa-uni.edu.vn/handle/PNK/8292
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spelling oai:localhost:PNK-82922023-04-25T07:37:46Z A new method for mining information of gut microbiome with probabilistic topic models Xin, Xiong Minrui, Li Yuyan, Ren probabilistic topic models CC BY Microbiome is closely related to many major human diseases, but it is generally analyzed by the traditional statistical methods such as principal component analysis, principal coordinate analysis, etc. These methods have shortcomings and do not consider the characteristics of the microbiome data itself (i.e., the “probability distribution” of microbiome). A new method based on probabilistic topic model was proposed to mine the information of gut microbiome in this paper, taking gut microbiome of type 2 diabetes patients and healthy subjects as an example. Firstly, different weights were assigned to different microbiome according to the degree of correlation between different microbiome and subjects. 2023-04-25T07:37:46Z 2023-04-25T07:37:46Z 2023 Book https://link.springer.com/article/10.1007/s11042-022-13916-7 https://dlib.phenikaa-uni.edu.vn/handle/PNK/8292 en application/pdf Springer
institution Digital Phenikaa
collection Digital Phenikaa
language English
topic probabilistic topic models
spellingShingle probabilistic topic models
Xin, Xiong
Minrui, Li
Yuyan, Ren
A new method for mining information of gut microbiome with probabilistic topic models
description CC BY
format Book
author Xin, Xiong
Minrui, Li
Yuyan, Ren
author_facet Xin, Xiong
Minrui, Li
Yuyan, Ren
author_sort Xin, Xiong
title A new method for mining information of gut microbiome with probabilistic topic models
title_short A new method for mining information of gut microbiome with probabilistic topic models
title_full A new method for mining information of gut microbiome with probabilistic topic models
title_fullStr A new method for mining information of gut microbiome with probabilistic topic models
title_full_unstemmed A new method for mining information of gut microbiome with probabilistic topic models
title_sort new method for mining information of gut microbiome with probabilistic topic models
publisher Springer
publishDate 2023
url https://link.springer.com/article/10.1007/s11042-022-13916-7
https://dlib.phenikaa-uni.edu.vn/handle/PNK/8292
_version_ 1764177438676353024
score 8.891145

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